Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902349.1_cds_XP_016452386.1_46631
CDS Infomation

[gene=LOC107776944] [db_xref=GeneID:107776944] [protein=glucomannan 4-beta-mannosyltransferase 2-like isoform X2] [protein_id=XP_016452386.1] [location=complement(join(2314..2357,2758..2831,2918..3315,3401..3514,3600..3736,3832..3942,7573..7825,8055..8153,8382..8711))] [gbkey=CDS]
Sequence

ATGGCAGAGGTTTCTACAAATGCATTGTTGCCAGAGACATTTCAGGGGACAGCAGCAGAT
ATAGCAGGCCAAATTGGGTTAATGTGGGAATTAATTAAAGCCCCATTGATAGTTCCATTA
TTGAGAGTTGCTATATACATATGTTTACCTATGGAACTTATGCTCTTCATTGAAAGGCTT
TATATGGGTATAGTTATTATTCTCGTAAAACTATTCTTGAAAAAACCAGATAAAAGGTAC
AAATGGGAACCAATGCGTGAGGATTTAGAGATTGGGAATTCAGGTTTTCCTATGGTACTT
GTTCAAATCCCCATGTTCAATGAAAAAGAGGTTTACAAGGTTTCTATAGGAGCTGCATGT
AACCTATCATGGCCATCTGATAGACTTGTGATTCAAGTTCTTGATGATTCTACTGACCCT
CTTATTAAGGATTTGGTTGAGAAAGAATGCTTAAGGTGGGCAGGCAAAGGCATTGACATT
AGATACCAAATCAGAGAGAGCAGAGGAGGCTACAAAGCTGGAGCTCTTAAAGAAGGATTA
AAGCGTGATTATGTCAAAGATTGCGAGTACGTTGTCATTTTTGACGCCGATTTCCGGCCT
GAACCGGATTTTCTCCGGCGAGCTATTCCTTTCCTTGTACATAACTCGGAAATTGCACTT
GTTCAAGGTCGTTGGCGTTTTGTGAATTCAAACGAATGCTTGTTGACGAGAATGCAAGAG
ATGTCACTAGATTACCATTTCACAGTGGAGCAAGAAGTGGGTTCATCTACTCATGCATTC
TTTGGCTTCAACGGAACTGGAGGGGTATGGAGAATAGCAGCGATTAATGAAGCTGGTGGA
TGGAAAGATAGAACAACTGTGGAGGATATGGACCTTGCAGTTAGAGCTAGCCTCAAAGGC
TGGAAGTTTCTTTACCTTGGTGATCTCCAGGTGAAAAGTGAACTTCCAAGTACATTCAAA
GCCTTCCGTTTTCAGCAGCATCGTTGGTCTTGTGGCCCCGCCAATTTGTTCAGAAAAATG
GTGATGGAGATTGTTAGGAACAAGAGAGTGAATATTTGGAAGAAGTTTTATGTGATCTAC
AGCTTCTTCTTCGTCCGAAAGATCATAGCTCATATGGTCACTTTTTTCTTCTTCTGCGTT
GTTCTTCCGTTGAGTCTTTTAGTTCCTGAAGTTGAAATACCTGTTTGGGCTGCCATCTAC
ATCCCCTGCATCATCACAATTCTCAATTCTGTTGGAACTCCAAGGTCAATTCATCTACTT
TTCTACTGGATTCTCTTTGAGAACGTCATGGCTTTCCACCGAACCAAGGCTACATTTATT
GGCTTGCTCAAAGCAAAGAGGGCTAACGAATGGGTTGTCACAGAAAAGCTAGGTGATGCT
CTCAAGAACAAAGATAAAACGAAACCAACCAAGAAACCTCGAGGATCTCTATTCGGAGAT
AGGATTCTACCACAAGAATTGGGATTTGCAGCTTTCCTTTTCTTCTGTGGATGCTATGAT
GTTCTCTATGGGAAAATGTTTTCTACTGGCTATCCAAGGGGACATAAGCTCAGGATATGA

Peptide Sequence

PEP ID

XP_016452386.1
PEP Infomation

PREDICTED: glucomannan 4-beta-mannosyltransferase 2-like isoform X2 [Nicotiana tabacum]
Sequence

MAEVSTNALLPETFQGTAADIAGQIGLMWELIKAPLIVPLLRVAIYICLPMELMLFIERL
YMGIVIILVKLFLKKPDKRYKWEPMREDLEIGNSGFPMVLVQIPMFNEKEVYKVSIGAAC
NLSWPSDRLVIQVLDDSTDPLIKDLVEKECLRWAGKGIDIRYQIRESRGGYKAGALKEGL
KRDYVKDCEYVVIFDADFRPEPDFLRRAIPFLVHNSEIALVQGRWRFVNSNECLLTRMQE
MSLDYHFTVEQEVGSSTHAFFGFNGTGGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKG
WKFLYLGDLQVKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEIVRNKRVNIWKKFYVIY
SFFFVRKIIAHMVTFFFFCVVLPLSLLVPEVEIPVWAAIYIPCIITILNSVGTPRSIHLL
FYWILFENVMAFHRTKATFIGLLKAKRANEWVVTEKLGDALKNKDKTKPTKKPRGSLFGD
RILPQELGFAAFLFFCGCYDVLYGKMFSTGYPRGHKLRI

Transcript Sequence

Gene sequence data has not been registered.